Pinned Repositories
InCliniGene
Graph Database solution for Clonal tracking with vector integration sites
Needleman-Wunsch-with-Python
I developed a script implementing the Needleman_Wunsch algorithm. The file format is .ipynb: for the algorithm there is a code cell with functions definition and a test cell to see the function working. Running the algorithm require the definition of the class typeException, written in the first cell. This class is used to implement unit tests.
neo4j-graph-db-analysis
Each analysis on the graph DB has been carried out through Python scripts which queries the DB and processes the results
Smith-Waterman-with-R
I developed a R package implementing the Smith-Waterman algorithm. The package building, check and installation works smoothly with 0 error (see log_file). BiocCheck results show 1 error because I’m not registered at the support site, 1 warning because BiocViews terms are invalid. Check the log_file for more details.
GennariAl's Repositories
GennariAl/Needleman-Wunsch-with-Python
I developed a script implementing the Needleman_Wunsch algorithm. The file format is .ipynb: for the algorithm there is a code cell with functions definition and a test cell to see the function working. Running the algorithm require the definition of the class typeException, written in the first cell. This class is used to implement unit tests.
GennariAl/neo4j-graph-db-analysis
Each analysis on the graph DB has been carried out through Python scripts which queries the DB and processes the results
GennariAl/Smith-Waterman-with-R
I developed a R package implementing the Smith-Waterman algorithm. The package building, check and installation works smoothly with 0 error (see log_file). BiocCheck results show 1 error because I’m not registered at the support site, 1 warning because BiocViews terms are invalid. Check the log_file for more details.