GenomicsNX

Pinned Repositories

BMI8130-notebooks-2021
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BrCa_cell_atlas
Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".
Language:R1 0 00
CAW
Cancer Analysis Workflow
Language:Groovy1 1 01
cfCloud
cfCloud: A Cloud-based Workflow for Cell-Free DNA Data Analysis
Language:Python1 1 01
chip-seq-pipeline
ENCODE Uniform processing pipeline for ChIP-seq
Language:Python1 1 00
CPNA
CPNA: Cancer progression analysis using network biology
Language:R0 1 01
IKAP
IKAP - Identifying K mAjor cell Population groups in single-cell RNA-seq analysis
Language:R17 3 1111
rFGM
rFGeM: Co-regulation Network Inference using an efficient FGM Profiling
Language:R1 1 00
SEpipe
An Automated Cloud-based Super Enhancer Analysis Pipe
1 1 01
TF_chipseq_pipeline
AQUAS TF ChIP-seq pipeline
Language:Java2 1 00

GenomicsNX's Repositories

GenomicsNX/15-Math-Concepts-Every-Data-Scientist-Should-Know
15 Math Concepts Every Data Scientist Should Know, published by Packt
GenomicsNX/brename
A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression
Language:Go0 0
GenomicsNX/code-rorp-prs
Code for Development and testing of a polygenic risk score for breast cancer aggressiveness
Language:HTML
GenomicsNX/colab-notes
Colab notebooks that have some practical significance in an R&D workflow or exploring content/ideas
GenomicsNX/data-formulator
🪄 Create rich visualizations with AI
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GenomicsNX/Data-Science-Projects
Explore my diverse collection of projects showcasing machine learning, data analysis, and more. Organized by project, each directory contains code, datasets, documentation, and resources. Dive in, to discover insights and techniques in data science. Reach out for collaborations and feedback.
Language:Jupyter Notebook0 0
GenomicsNX/data-science-resources
Resources relating to data science.
GenomicsNX/DataScience_Interactive_Python
Python interactive dashboards for learning data science
GenomicsNX/DataViz
Data Visualization With Matplotlib and Seaborn
GenomicsNX/DeOldify
A Deep Learning based project for colorizing and restoring old images (and video!)
Language:Python0 0
GenomicsNX/Doing-Meta-Analysis-in-R
[Read-Only] All R code and source files for the online guide "Doing Meta-Analysis with R: A Hands-On Guide"
Language:R0 0
GenomicsNX/DRVI_reproducibility
Reproducibility repository of DRVI
GenomicsNX/END-TO-END-GENERATIVE-AI-PROJECTS
End to End Generative AI Industry Projects on LLM Models with Deployment_Awesome LLM Projects
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GenomicsNX/enrichment-analysis-training
Course material for Enrichment analysis course by SIB
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GenomicsNX/generative-ai-for-beginners
18 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/
Language:Jupyter Notebook0 0
GenomicsNX/GSE_95077
Analysis for "Amiloride, an old diuretic drug, is a potential therapeutic agent for multiple myeloma"
Language:Jupyter Notebook0 0
GenomicsNX/Multi-PDFs_ChatApp_AI-Agent
Meet MultiPDF 📚 Chat AI App! 🚀 Chat seamlessly with Multiple PDFs using Langchain, Google Gemini Pro & FAISS Vector DB with Seamless Streamlit Deployment. Get instant, accurate responses from Awesome Google Gemini OpenSource language Model. 📚💬 Transform your PDF experience now! 🔥✨
GenomicsNX/Multi-Tissue_Analysis_DL_AD
Integrative Multi-Tissue Analysis Using Deep Learning Reveals Genetic Mechanisms and Drug Repositioning Strategies for Alzheimer’s Disease
Language:R
GenomicsNX/multiDGD
multiDGD: A versatile deep generative model for multi-omics data
GenomicsNX/OpenAI
GenomicsNX/page-assist
Use your locally running AI models to assist you in your web browsing
GenomicsNX/Parkinsons-Disease-Detection
Using Random Forest Machine Learning Model to Analyze Voice Disorders for Parkinson's Disease Detection
Language:Jupyter Notebook0 0
GenomicsNX/plotly-crash-course
This Crash Course will cover all you need to know to start using Plotly in your projects.
Language:Jupyter Notebook
GenomicsNX/Qwen2.5-VL
Qwen2.5-VL is the multimodal large language model series developed by Qwen team, Alibaba Cloud.
GenomicsNX/scRNAseq_of_PDAC_PBMC
Language:R0 0
GenomicsNX/Seaborn_Viz
Data Visualization With Seaborn
Language:Jupyter Notebook
GenomicsNX/tall
Text Analysis for aLL
GenomicsNX/ThinkPython2
Boo and supporting code for Think Python, 2nd edition, by Allen Downey.
Language:TeX
GenomicsNX/TNBC-meta-analysis
Code for TNBC meta-analysis
Language:R0 0
GenomicsNX/xOmicsShiny_app
R Shiny application for cross omics data analysis. In revision with Bioinformatics Adv.
Language:HTML