/loci-notebooks

Primary LanguageJupyter NotebookOtherNOASSERTION

loci-notebooks

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Jupyter notebooks for Loc-I

Pre-requisites

  • docker
  • docker-compose

Quickstart

Using a minimal docker stack (python only)

$ docker-compose up -d --build

Using a minimal docker stack (python only) using docker image (no building)

$ docker-compose -f docker-compose.useimages.yml up -d 

Running docker-compose logs should give you the session token to use to login via http://localhost:888

To stop the notebook server:

$ docker-compose down -v

R/Python option

You can also run these with R and Python via the datascience Jupyter stack

$ docker-compose -f docker-compose.datascience.yml up -d --build

Running docker-compose logs should give you the session token to use to login via http://localhost:888

To stop the notebook server:

$ docker-compose down -v