/in_limbo

A Python module to analyze fMRI data using the 'in limbo'-approach and sandwich estimators

Primary LanguagePython

In limbo fMRI package

This Python package is a supplement to the the paper ``An antidote to the imager's fallacy, or how to identify brain areas that are in limbo''.

It includes the original code, and, importantly, also a collection of NiPype interfacs and workflows that should make it relatively easy to apply the methods of the paper to your own fMRI dataset.

Installation

To install this package, simply do

pip install in_limbo

or for the latest development version:

pip install git+git://github.com/Gilles86/in_limbo.git#egg=in_limbo

Simulations

Notebooks redoing the simulations of the paper can be found here

Examples