/KEGG

Scripts for gathering some data form the KEGG database

Primary LanguageShell

Various scripts or files related to KEGG database.

get_KEGG_rxn_files.sh = script to download all "Reaction" pages from KEGG database
collate_rxn_files.sh = extracts desired info from the html tables in the downloaded .rxn files
KEGG_reactions.rxns = TSV file of KEGG Reactions

get_KEGG_organisms.sh = script to fetch KEGG organism identifiers and names
KEGG_organisms.txt = output of get_KEGG_organisms.sh