Pinned Repositories
AlignerBoost
AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality framework
DFUStrainsWGS
This repo contains scripts related to the whole genome sequencing of >200 isolates of S. aureus from people with diabetic foot ulcers (DFU100 project)
EAGenomeAssembly
Breaking out the assembly pipeline into its own repo (mapping files are still located in ClubGrice/mapping_files until publishable)
HmmUFOtu
An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing
IowaWound
Iowa Wound Pain analyses 2020
MSGseqTK
A Metagenomics Shotgun Sequencing Toolkit for NGS read mapping and cleaning based on a novel incremental and parallel FMD-index algorithm
Staphyloxanthin
Code repository for Staphyloxanthin paper
Grice Lab's Repositories
Grice-Lab/AlignerBoost
AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality framework
Grice-Lab/HmmUFOtu
An HMM and Phylogenetic Placement based Ultra-Fast Taxonomy Assignment Tool for 16S sequencing
Grice-Lab/DFUStrainsWGS
This repo contains scripts related to the whole genome sequencing of >200 isolates of S. aureus from people with diabetic foot ulcers (DFU100 project)
Grice-Lab/EAGenomeAssembly
Breaking out the assembly pipeline into its own repo (mapping files are still located in ClubGrice/mapping_files until publishable)
Grice-Lab/IowaWound
Iowa Wound Pain analyses 2020
Grice-Lab/MSGseqTK
A Metagenomics Shotgun Sequencing Toolkit for NGS read mapping and cleaning based on a novel incremental and parallel FMD-index algorithm
Grice-Lab/Staphyloxanthin
Code repository for Staphyloxanthin paper