Pinned Repositories
CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
Cell_Magic_Wand
Cell Magic Wand Tool for FIJI
ephys
E phys stuff
GrimmSnark
Config files for my GitHub profile.
Image_analysis_fiji
Analysis scripts utilised for mouse connectivity paper
imagejMacros
A bunch of imagej macros used to automate processes
mea
Multi Electrode Array Code for Flame System
microglia
2023 Undegrad microglia scripts
retinaCaImaging
Two_photon_imaging
This folder should contain everything you need for running code on the 2P system
GrimmSnark's Repositories
GrimmSnark/mea
Multi Electrode Array Code for Flame System
GrimmSnark/ephys
E phys stuff
GrimmSnark/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
GrimmSnark/Cell_Magic_Wand
Cell Magic Wand Tool for FIJI
GrimmSnark/GrimmSnark
Config files for my GitHub profile.
GrimmSnark/Image_analysis_fiji
Analysis scripts utilised for mouse connectivity paper
GrimmSnark/imagejMacros
A bunch of imagej macros used to automate processes
GrimmSnark/microglia
2023 Undegrad microglia scripts
GrimmSnark/retinaCaImaging
GrimmSnark/Two_photon_imaging
This folder should contain everything you need for running code on the 2P system
GrimmSnark/Two_photon_imaging_V2
New version of two photon imaging code