Dependencies for this pipeline are the same as those required for SRST2.
The code is modified based on the SsuisSerotyping_pipeline Project from Taryn B.T.Athey https://github.com/streplab/SsuisSerotyping_pipeline
Author of the code is Bihan Zhu
RSRT2:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237778/ RSRT2 Repository: https://github.com/katholt/srst2 SsuisSerotyping pipeline:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4957933/ Actinobacillus Pleuropneumoniae Serotyping:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6008488/