Pinned Repositories
InfoManagementSystems
Labbi - lab inventory management software
BBMap
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
de_novo_terra_hold
Dengue_Mapping
docker-builds
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
dockstore-tool-bamstats
following along tutorial
doh_terra_hold
Genome_Analysis
gisaid_script
public_health_bacterial_genomics
HNHalstead's Repositories
HNHalstead/BBMap
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
HNHalstead/de_novo_terra_hold
HNHalstead/Dengue_Mapping
HNHalstead/docker-builds
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
HNHalstead/dockstore-tool-bamstats
following along tutorial
HNHalstead/doh_terra_hold
HNHalstead/Genome_Analysis
HNHalstead/gisaid_script
HNHalstead/public_health_bacterial_genomics
HNHalstead/public_health_bioinformatics
Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.
HNHalstead/public_health_viral_genomics
Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of viral pathogens of concern, especially the SARS-CoV-2 virus
HNHalstead/rnaseq
Fast RNAseq pipeline
HNHalstead/waphl-docker-builds