- Predicting lncRNA-protein interactions based on network similarity
- ues python 3.6.12
- numpy 1.19.2
- pandas 1.1.1
- scipy 1.5.2
- sklearn
- pytorch 1.4
- matplotlib 3.3.1
- 24_protein.xlsx: list of protein names.
- 982_lncRNaA.xlsx: list of lncRNA names.
- 4152_interaction.xlsx:proteins and lncRNAs association network.
- calcul_height_score.py: the protein set to obtain the highest score of the lncRNA set in the predicted results
- k_5_verifi.py: 5-k cross validation method involved in the experiment.
- pred_score_4152_lncRNA_protein.xlsx: The predicted scores of lncRNA and protein were calculated by LPLSG.
- predict_10_LPI.xlsx: The predicted scores of top 10 lncRNAs corresponding to proteins.
- Supporting materials involved in the article.