Pinned Repositories
Biotools
Bookmark
Back up of bookmarks
ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
Code-Cheatsheet
Cheat sheets for coding
doc-template
Genome-annotation
Genome_interval_list
Interval list used for sequencing analysis
HarmoniSV
A toolkit to harmonize and filter structural variations across methods and samples.
HiFiAdapterFilt
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
RNAseq_RSEM_tutorial
Tutorial for RNA-seq analysis using RSEM
Han-Cao's Repositories
Han-Cao/HarmoniSV
A toolkit to harmonize and filter structural variations across methods and samples.
Han-Cao/Biotools
Han-Cao/Bookmark
Back up of bookmarks
Han-Cao/ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
Han-Cao/Code-Cheatsheet
Cheat sheets for coding
Han-Cao/doc-template
Han-Cao/Genome-annotation
Han-Cao/Genome_interval_list
Interval list used for sequencing analysis
Han-Cao/HiFiAdapterFilt
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
Han-Cao/MkDocs-template
Han-Cao/pangenie
Pangenome-based genome inference
Han-Cao/RNAseq_RSEM_tutorial
Tutorial for RNA-seq analysis using RSEM
Han-Cao/Software-setup
Software list and setup for my working environment