Haoran-Xue/Genetic-variation-and-clonal-diversity-in-floating-aquatic-plants

This repository contains the scripts and the processed data (tables and figures) of the PVE Eichhornia project.

Folders:

1. FASTQ trimming, bam processing, and alignment
   
2. SNP calling and vcf filtering
   
3. Dendrogram construction
   
4. Mantel tests