Hassoun Lab: Computational Systems + Synthetic Biology

ASAP-SML

ASAP-SML: An Antibody Sequence Analysis Pipeline Using Statistical Testing and Machine Learning

BAM

Biotransformation-based annotation method

Boost-RS

Boosted Embeddings for Recommender Systems and its Application to Enzyme-Substrate Interaction Prediction

CSI

ELP

Enzymatic Link Prediction

EPP

Code for the paper "Enzyme Promiscuity Prediction using hierarchy-informed multi-label classification"

GNN-SOM

Site-of-Metabolsim prediction using Graph Neural Networks.

JESTR1

Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data

PROXIMAL2

PROXIMAL2 algorithm

PUMA

Pathway Activity Analysis and Metabolite Annotation for Untargeted Metabolomics using Probabilistic Modeling

HassounLab/GNN-SOM

Site-of-Metabolsim prediction using Graph Neural Networks.

HassounLab/EPP

Code for the paper "Enzyme Promiscuity Prediction using hierarchy-informed multi-label classification"

HassounLab/ASAP-SML

ASAP-SML: An Antibody Sequence Analysis Pipeline Using Statistical Testing and Machine Learning

HassounLab/Boost-RS

Boosted Embeddings for Recommender Systems and its Application to Enzyme-Substrate Interaction Prediction

HassounLab/ELP

Enzymatic Link Prediction

HassounLab/PROXIMAL2

PROXIMAL2 algorithm

HassounLab/PUMA

Pathway Activity Analysis and Metabolite Annotation for Untargeted Metabolomics using Probabilistic Modeling

HassounLab/BAM

Biotransformation-based annotation method

HassounLab/CSI

HassounLab/ESP

ESP model

HassounLab/gEFM

HassounLab/MDFlow

HassounLab/PER_BRENDA