Hendricks27

Hendricks27's Stars

• LIPtoH/TS-SE-Tool

  Truck Simulator Save Editor Tool

  Language:C#54185

• CoffeSiberian/truck-tools

  Edit your saves game in Euro Truck Simulator 2 and American Truck Simulator with this simple Desktop App

  Language:TypeScript534

• PacificBiosciences/pbmm2

  A minimap2 frontend for PacBio native data formats

  Language:Raku17829

• ThinkParQ/beegfs

  Public repository for the BeeGFS Parallel File System

  Language:C++9216

• yfukasawa/LongQC

  LongQC is a tool for the data quality control of the PacBio and ONT long reads.

  Language:C15419

• yukiteruono/pbsim3

  PBSIM3: a simulator for all types of PacBio and ONT long reads

  Language:C++675

• lh3/dipcall

  Reference-based variant calling pipeline for a pair of phased haplotype assemblies

  Language:JavaScript9710

• schatzlab/crossstitch

  Code for phasing SVs with SNPs

  Language:Java523

• marbl/verkko

  Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and Oxford Nanopore ultra-long reads.

  Language:Python31430

• freebayes/freebayes

  Bayesian haplotype-based genetic polymorphism discovery and genotyping.

  Language:C++796264

• CompEpigen/figeno

  Tool for plotting sequencing data along genomic coordinates.

  Language:Python2538

• zlib-ng/zlib-ng

  zlib replacement with optimizations for "next generation" systems.

  Language:C1.6k266

• dpryan79/MethylDackel

  A (mostly) universal methylation extractor for BS-seq experiments.

  Language:C16743

• neilmunday/slurm-mail

  Slurm-Mail is a drop in replacement for Slurm's e-mails to give users much more information about their jobs compared to the standard Slurm e-mails.

  Language:Python9939

• heathsc/gemBS-rs

  A re-write of the gemBS pipeline framework in Rust

  Language:Rust41

• happy-fish-01/National_interest_waiver_waittime

  USCIS Employment-based-2 national interest waiver wait time

  897

• rrwick/Bandage

  a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

  Language:C++59398

• grafana/grafana

  The open and composable observability and data visualization platform. Visualize metrics, logs, and traces from multiple sources like Prometheus, Loki, Elasticsearch, InfluxDB, Postgres and many more.

  Language:TypeScript65.7k12.3k

• whatshap/whatshap

  Read-based phasing of genomic variants, also called haplotype assembly

  Language:Python34540

• tjy-gitnub/win12

  Windows 12 网页版，在线体验 点击下面的链接在线体验

  Language:JavaScript6.7k829

• PacificBiosciences/pbbioconda

  PacBio Secondary Analysis Tools on Bioconda. Contains list of PacBio packages available via conda.

  25645

• zhou-lab/biscuit

  BISulfite-seq CUI Toolkit

  Language:C6424

• twlab/methylGrapher

  WGBS analysis pipeline for Genome Graph

  Language:Python4

• uio-bmi/graph_peak_caller

  ChIP-seq peak caller for reads mapped to a graph-based reference genome

  Language:Python219

• jonassibbesen/rpvg

  Method for inferring path posterior probabilities and abundances from pangenome graph read alignments

  Language:C++507

• haowulab/DSS

  Language:R1413

• owkin/PyDESeq2

  A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

  Language:Python60669

• danielecook/Awesome-Bioinformatics

  A curated list of awesome Bioinformatics libraries and software.

  3.2k619

• pinellolab/GRAFIMO

  GRAph-based Finding of Individual Motif Occurrences

  Language:Python302

• adamnovak/pystream-protobuf

  Python implementation of stream library for streaming google protocol buffer objects

  1