Pinned Repositories
methrix
An R :package: for fast and flexible DNA methylation analysis
amplicon_bisulfite_seq_pipeline
Pipeline to process amplicon bisulfite sequencing results
amplicon_seq_pipeline
FetalHierachy
WGBS of the fetal hematopoiesis of mice
mouse_mitotic_clock
Transfering the epigenetic mitotic clock from Yang et al. Genome Biology (2016) to mice.
pipeline-pinfish-analysis
Pipeline for annotating genomes using long read transcriptomics data with pinfish
repguide-1
Repguide_ShinyApp
Shiny application to run the R library Repguide from a webserver.
ScSnakeMeth
Single cell whole genome bisulfite sequencing pipeline automated with Snakemake.
TINAT
Analysis of TINATs for neoantigen discovery upon epigenetic drug treatment
HeyLifeHD's Repositories
HeyLifeHD/amplicon_bisulfite_seq_pipeline
Pipeline to process amplicon bisulfite sequencing results
HeyLifeHD/mouse_mitotic_clock
Transfering the epigenetic mitotic clock from Yang et al. Genome Biology (2016) to mice.
HeyLifeHD/pipeline-pinfish-analysis
Pipeline for annotating genomes using long read transcriptomics data with pinfish
HeyLifeHD/Repguide_ShinyApp
Shiny application to run the R library Repguide from a webserver.
HeyLifeHD/ScSnakeMeth
Single cell whole genome bisulfite sequencing pipeline automated with Snakemake.
HeyLifeHD/TINAT
Analysis of TINATs for neoantigen discovery upon epigenetic drug treatment
HeyLifeHD/amplicon_seq_pipeline
HeyLifeHD/FetalHierachy
WGBS of the fetal hematopoiesis of mice
HeyLifeHD/repguide-1
HeyLifeHD/ID3_DNArepair
Project focusing on the role of ID3 in DNA repair.
HeyLifeHD/jmml_coo
Multiomics analysis of a JMML cohort with a focus on DNA methylation, to define the cell of origin for different subgroups.
HeyLifeHD/peakseason
An R package for rapid bigWig file summarization and visualization.
HeyLifeHD/rp-bp
Rp-Bp is a Bayesian approach to predict, at base-pair resolution, ribosome occupancy and translation.
HeyLifeHD/Scnn1b_mouse
Links and code of the "Epigenetic reprogramming of airway macrophages drives polarization and inflammation in muco-obstructive lung disease" manuscript.
HeyLifeHD/UpSetR_scaleAxis
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..