XmlValidation program used to find what are the changes between two version of XML files. It is used for PAcbio Autotyper output comparision.
com.histo.xmlvalidation.controller.XMLComparator_SMBFile //10.201.20.198/Volume1Backup/pbvol2/mani/smrtlink/userdata/074016/Reanalysis/AutoType/ //10.201.20.198/Volume1Backup/pbvol2/mani/smrtlink_new/userdata/074016/Reanalysis/AutoType/ //10.201.20.198/Volume1Backup/pbvol2/mani/autoTyperValidator/
It is used for SNP pre autotyping program. Remove the "_noise" string from amplicon_analysis.fasta if present(\074064\Reanalysis\S105--S105\amplicon_analysis.fasta). create a new json file based on the data from exec PacBioSNPGetBarcodeData " + barCodeId + "," +jobId+ ""
com.histo.pacbiosnp.process.PacBioSNPEntryPoint
//10.201.20.198/Volume1Backup/pbvol2/mani/074064/
S105--S105
Read .csv file from the given path and convert into json file.
C:\csvFiles\651512481801.csv
This is used for R&D WGS pipeline. Read the .counts files from source path and convert into .xlsx format.
com.histo.textToExcel.process.TextFileToExcel
C:\test\sfinderOutput.template.xlsx
C:\test\
C:\test\output