Hogfeldt/ctDNAtool

Issues

• fix stride_binning

  #41 opened 4 years ago by EliasRosendahl
  0

• Refactor using sys.path

  #40 opened 4 years ago by EliasRosendahl
  0

• Handle N column in summaries_data()

  #37 opened 4 years ago by EliasRosendahl
  0

• Refactor cli_flow with file_of_files

  #34 opened 4 years ago by EliasRosendahl
  0

• Docstrings for cli.py commands.

  #33 opened 4 years ago by EliasRosendahl
  0

• Investigate why some .pickle files are truncated.

  #32 opened 4 years ago by EliasRosendahl
  0

• Add logging

  #3 opened 4 years ago by Hogfeldt
  2

• Filter out fragments with low match confidence

  #19 opened 4 years ago by EliasRosendahl
  0

• Summaries manipulation refactor

  #18 opened 4 years ago by EliasRosendahl
  0

• Manipulator for summing out an axis.

  #17 opened 4 years ago by EliasRosendahl
  0

• Manipulation for aggregating all regions in a sample

  #9 opened 4 years ago by Hogfeldt
  1

• Generator: Fragment lengths and end sequences

  #4 opened 4 years ago by Hogfeldt
  1

• Create a data abstraction

  #8 opened 4 years ago by Hogfeldt
  1

• Preprocess genome binning create chr sorting

  #7 opened 4 years ago by Hogfeldt
  0

• Manipulation: binning, sliding window with stride parameter

  #1 opened 4 years ago by Hogfeldt
  3

• Better file format for outputting data

  #2 opened 4 years ago by Hogfeldt
  1

• Setup a test suite

  #5 opened 4 years ago by Hogfeldt
  1