HosnaJabbari
Hosna is an associate professor of bioinformatics. This page contains the work done in her research lab (COBRA Lab).
University of AlbertaEdmonton
Pinned Repositories
CCJ
MFE method for predicting the psuedoknotted secondary structures of RNA sequences.
CParty
Conditional partition function
DataAugmentation
Datasets
Multiple datasets used for testing CCJ and HFold
DinoKnot
RNA/DNA/PMO Pseudoknotted Secondary Structure Interaction Prediction Using Relaxed Hierarchical Folding
frameshifting
This repository holds all data for the paper entitled "SARS-CoV-2 ribosomal frameshifting pseudoknot: Improved secondary structure prediction and detection of inter-viral structural similarity"
HFold
RNA Pseudoknotted Secondary Structure Prediction Using Strict Hierarchical Folding
Iterative-HFold
RNA Pseudoknotted Secondary Structure Prediction Using Relaxed Hierarchical Folding
Knotty
MFE method for predicting the psuedoknotted secondary structures of RNA sequences.
Machine-learning-in-Muscular-dystrophy
HosnaJabbari's Repositories
HosnaJabbari/Knotty
MFE method for predicting the psuedoknotted secondary structures of RNA sequences.
HosnaJabbari/Iterative-HFold
RNA Pseudoknotted Secondary Structure Prediction Using Relaxed Hierarchical Folding
HosnaJabbari/CCJ
MFE method for predicting the psuedoknotted secondary structures of RNA sequences.
HosnaJabbari/DinoKnot
RNA/DNA/PMO Pseudoknotted Secondary Structure Interaction Prediction Using Relaxed Hierarchical Folding
HosnaJabbari/Machine-learning-in-Muscular-dystrophy
HosnaJabbari/frameshifting
This repository holds all data for the paper entitled "SARS-CoV-2 ribosomal frameshifting pseudoknot: Improved secondary structure prediction and detection of inter-viral structural similarity"
HosnaJabbari/HFold
RNA Pseudoknotted Secondary Structure Prediction Using Strict Hierarchical Folding
HosnaJabbari/CParty
Conditional partition function
HosnaJabbari/DataAugmentation
HosnaJabbari/Datasets
Multiple datasets used for testing CCJ and HFold
HosnaJabbari/DinoKnot_data
This folder contains all test data for DinoKnot
HosnaJabbari/GuessKnot
HosnaJabbari/HotSpots
HosnaJabbari/JUP
HosnaJabbari/KnotAli
HosnaJabbari/MicrobiomeBenchmarking
Microbiome benchmarking -- honey bee
HosnaJabbari/StemCell