Pinned Repositories
tricycle
bindSC
Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and CyTOF data
COPILOT
Single cell RNA-seq preprocessing tool for gene-by-cell matrices of UMI counts. It is recommended to use the raw spliced and unpliced counts matrices produced by scKB pipeline as the input of copilot.
scKB
Use kallisto and bustools to call the gene-cell matrix for both spliced and unspliced transcripts of scRNA-seq
Brassinosteroid-gene-regulatory-networks-at-cellular-resolution
scRNA-seq-for-rice
Rice scRNA-seq data analysis, template and final files stoarage
Hsu-Che-Wei's Repositories
Hsu-Che-Wei/COPILOT
Single cell RNA-seq preprocessing tool for gene-by-cell matrices of UMI counts. It is recommended to use the raw spliced and unpliced counts matrices produced by scKB pipeline as the input of copilot.
Hsu-Che-Wei/scKB
Use kallisto and bustools to call the gene-cell matrix for both spliced and unspliced transcripts of scRNA-seq
Hsu-Che-Wei/bindSC
Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and CyTOF data