Pinned Repositories
Gene_Annotation_Pipeline
Gene Annotation Pipeline
GenomeQC
HuffordLab.github.io
Hufford Lab Website
Maize_NC358
The repository for codes developed to generated the Maize NC358 assemblies and analyses.
Maize_WGS_Build
Code and Data to include in WGS Build
NAM-genomes
Detailed bioinformatics scripts and methods used in the NAM genome paper.
NSF_DEB
Full Proposal: The Evolutionary Role of Hybridization and Introgression in the Genus Zea
panand_genome_evolution
repository for panand genome evolution paper
streptochaeta
methods for the Streptochaeta genome paper
Wang_et_al._Demography
Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"
Hufford Lab's Repositories
HuffordLab/NAM-genomes
Detailed bioinformatics scripts and methods used in the NAM genome paper.
HuffordLab/GenomeQC
HuffordLab/Wang_et_al._Demography
Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"
HuffordLab/Maize_NC358
The repository for codes developed to generated the Maize NC358 assemblies and analyses.
HuffordLab/Maize_WGS_Build
Code and Data to include in WGS Build
HuffordLab/NSF_DEB
Full Proposal: The Evolutionary Role of Hybridization and Introgression in the Genus Zea
HuffordLab/streptochaeta
methods for the Streptochaeta genome paper
HuffordLab/Gene_Annotation_Pipeline
Gene Annotation Pipeline
HuffordLab/HuffordLab.github.io
Hufford Lab Website
HuffordLab/panand_genome_evolution
repository for panand genome evolution paper
HuffordLab/ZeaGeneFlow_SNPChip
HuffordLab/B104
B104 assembly and atlas project
HuffordLab/Biol462
Course Repository for Biology 462: Evolutionary Genetics
HuffordLab/Convergence_Domestication
Review on the extent of convergence during domestication of cereals
HuffordLab/Crop_Adaptation_Gene_Flow
HuffordLab/Hufnagel_et_al._Teosinte_Hybrid_Zones
repository for analysis pipeline and scripts for Hufnagel et al. 2021
HuffordLab/Hufnagel_NSF_GRFP
HuffordLab/Inbreeding_Depression
HuffordLab/Juicer_PanAnd
modified scripts for Juicer to run effeceintly
HuffordLab/MaizeGDB_gff3_format
script to convert GFF3 files to maizeGDB specifications
HuffordLab/Shawn_Goggins