Hurricaner1989

Research scientist at HP Labs

HP Inc.Palo Alto, CA

Pinned Repositories

INDEED
An Implementation of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection
Language:R0 0 00
dwgLASSO-R-codes
R code implementing dwgLASSO algorithm from Zuo et. al.'s BMC Bioinformatics paper (Incorporating prior biological knowledge for network-based differential gene expression analysis using differentially weighted graphical LASSO)
Language:R5 4 03
INDEED-R-codes
R code implementing INDEED algorithm from Zuo et. al.'s Methods paper (INDEED: Integrated differential expression and differential network analysis of omic data for biomarker discovery)
Language:R1 2 00
INDEED-simulation
This repository contains the codes for INDEED simulation work
Language:R0 2 00
LOPC-Matlab-codes
Matlab code implementing LOPC algorithm from Zuo et. al.'s Methods paper (Biological network inference using low order partial correlation)
Language:MATLAB1 2 00
RPPA-Matlab-R-codes
Matlab and R codes implementing the network construction and topological analysis method in Rency S Varghese, Yiming Zuo, et. al.'s paper (Protein network construction using reverse phase protein array data) submitted to Methods for review.
Language:MATLAB0 2 00
INDEED
An Implementation of Integrated Differential Expression and Differential Network Analysis for Cancer Biomarker Discovery
Language:R4 1 144

Hurricaner1989/dwgLASSO-R-codes
R code implementing dwgLASSO algorithm from Zuo et. al.'s BMC Bioinformatics paper (Incorporating prior biological knowledge for network-based differential gene expression analysis using differentially weighted graphical LASSO)
Language:R5 4 03
Hurricaner1989/INDEED-R-codes
R code implementing INDEED algorithm from Zuo et. al.'s Methods paper (INDEED: Integrated differential expression and differential network analysis of omic data for biomarker discovery)
Language:R1 2 00
Hurricaner1989/LOPC-Matlab-codes
Matlab code implementing LOPC algorithm from Zuo et. al.'s Methods paper (Biological network inference using low order partial correlation)
Language:MATLAB1 2 00
Hurricaner1989/INDEED-simulation
This repository contains the codes for INDEED simulation work
Language:R0 2 00
Hurricaner1989/RPPA-Matlab-R-codes
Matlab and R codes implementing the network construction and topological analysis method in Rency S Varghese, Yiming Zuo, et. al.'s paper (Protein network construction using reverse phase protein array data) submitted to Methods for review.
Language:MATLAB0 2 00