Innovation Center for Biomedical Informatics (ICBI) at Georgetown University
ICBI at Georgetown University Medical Center is an academic hub for cutting-edge research in biomedical informatics. Connect with us @ICBI_Georgetown
Washington, DC
Pinned Repositories
.github
Welcome to Georgetown University Innovation Center for Biomedical Informatics !
BISR_Resource
Tutorials and training material from Georgetown University Biomedical Informatics Shared Resources (BISR)
CINdex
CINdex Bioconductor package. Read more here: https://www.bioconductor.org/packages/release/bioc/html/CINdex.html
gdoc
G-DOC Web Application
medturk
medTurk (inspired by Amazon's Mechanical Turk) supports clinical research by using the ingenuity of humans to convert unstructured clinical notes into structured data.
neoantigeR
a R package to identify neoantigens from NGS data
Open-Science-Projects
Open Science Projects at Georgetown-ICBI
sevenbridgesworkflows
Genomics pipelines in JSON format
SIGH
Significant Intratumor Genomic Heterogeneity
viGEN
viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data
Innovation Center for Biomedical Informatics (ICBI) at Georgetown University's Repositories
ICBI/viGEN
viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data
ICBI/neoantigeR
a R package to identify neoantigens from NGS data
ICBI/gdoc
G-DOC Web Application
ICBI/Open-Science-Projects
Open Science Projects at Georgetown-ICBI
ICBI/medturk
medTurk (inspired by Amazon's Mechanical Turk) supports clinical research by using the ingenuity of humans to convert unstructured clinical notes into structured data.
ICBI/BISR_Resource
Tutorials and training material from Georgetown University Biomedical Informatics Shared Resources (BISR)
ICBI/CINdex
CINdex Bioconductor package. Read more here: https://www.bioconductor.org/packages/release/bioc/html/CINdex.html
ICBI/MetPlus-DB
ICBI/rembrandt-mri
Code used for the REMBRANDT MRI paper
ICBI/sevenbridgesworkflows
Genomics pipelines in JSON format
ICBI/SIGH
Significant Intratumor Genomic Heterogeneity
ICBI/.github
Welcome to Georgetown University Innovation Center for Biomedical Informatics !
ICBI/AIMAHEAD_GU
AIM AHEAD at Georgetown University
ICBI/AIMAHEAD_GU_publicCourseData
Public repository containing public materials for associated online courses
ICBI/AISAIC
Accurate Identification of Significant Aberrations in Cancer Genome (AISAIC)
ICBI/Data.Bridge.Notebooks
AIM AHEAD Data Bridge Notebooks
ICBI/grails-gcore
G-CORE Project
ICBI/LifeStressorDigitalTwin
ICBI/MACE2K
MACE2K project members develop new computational methods and software to retrieve genes, disease, variant, drug related information from multiple sources of big data including: clinicaltrials.gov, PubMed abstracts, open access articles, and conference proceedings. The software suite primarily contains natural language processing features, machine learning tools and a data visualization module to view and edit relationships between entities extracted. This suite supports biocurators in their workflow to capture the best available evidence for Precision Medicine from unstructured text.
ICBI/Supporting-Files-For-Grants
Supporting Files For Grants
ICBI/analysis-server
Analysis server
ICBI/ICBI_multi_omics_processing_public
Describes our multi omics analysis workflow
ICBI/OPRMA
Online Platform for RNA Modification Analysis (OPRMA) for CLIP-seq data analysis