Pinned Repositories
checkfiles
go-sqs-deduplication
igvf-catalog
Catalog API for the IGVF project
igvf-metadata-submitter
Metadata Submitter & Editor based on Google Apps Script
igvf-python-client
Autogenerated Python client for the IGVF API
igvf-subsample-db
This tools subsamples Postgres DB of an IGVF server
igvf-ui
The Next.js-based UI portion of IGVF-DACC that works with igvfd
igvfd
Metadata database for IGVF project
ontology
The script is used to update the ontology versions used for searching and validation in IGVF project.
snovault
The SnoVault general purpose hybrid object-relational database
IGVF-DACC's Repositories
IGVF-DACC/igvf-catalog
Catalog API for the IGVF project
IGVF-DACC/checkfiles
IGVF-DACC/igvf-python-client
Autogenerated Python client for the IGVF API
IGVF-DACC/igvfd
Metadata database for IGVF project
IGVF-DACC/igvf-metadata-submitter
Metadata Submitter & Editor based on Google Apps Script
IGVF-DACC/ontology
The script is used to update the ontology versions used for searching and validation in IGVF project.
IGVF-DACC/igvf-ui
The Next.js-based UI portion of IGVF-DACC that works with igvfd
IGVF-DACC/snovault
The SnoVault general purpose hybrid object-relational database
IGVF-DACC/fastq_stats
Simple rust program that calculates couple of fastq stats
IGVF-DACC/igvf-jamboree
IGVF Jamboree code based on Zero to Jupyterhub with Kubernetes on GCP
IGVF-DACC/igvf-r-client
Autogenerated R client for the IGVF API
IGVF-DACC/igvf_utils
Tools that are useful to any IGVF submitting group.
IGVF-DACC/seqspec
machine-readable file format for genomic library sequence and structure
IGVF-DACC/shared-infrastructure
Reusable or common CDK pieces
IGVF-DACC/snovault-index
IGVF-DACC/snovault-search
IGVF-DACC/anvil-file-transfer
IGVF-DACC/catalog-join-tables
Create join tables for columnar database
IGVF-DACC/cdk-igvf-dev
Repo for internal infrastructure in igvf-dev account
IGVF-DACC/cdk-igvf-prod
Repo for internal infrastructure in igvf-prod account
IGVF-DACC/cdk-igvf-sandbox
Repo for internal infrastructure in igvf-sandbox (igvf-staging) account
IGVF-DACC/cdk-igvf-staging
Repo for internal infrastructure in igvf-staging account
IGVF-DACC/fastq-rs
Fork of rust fastq package
IGVF-DACC/igvf-async-python-client
Autogenerated async Python client for the IGVF API
IGVF-DACC/igvf-client-openapi-spec
Autogenerated OpenAPI specification used by IGVF clients
IGVF-DACC/igvf-ng
The Next.js-based UI portion of IGVF-DACC that works with igvfd
IGVF-DACC/pre-commit-hooks
Some out-of-the-box hooks for pre-commit
IGVF-DACC/sc-pipeline-management
IGVF-DACC/vcfAssemblyChecker
IGVF-DACC/wrangler-tools