Irenexzwen
Bioinformatics and Systems Biology PhD candidate at the University of California San Diego
La Jolla, CA
Pinned Repositories
176-Shortreads-aligner
CS176 finaly project, fast shortreads aligner using BWA
3D-genome-gitbook
An ebook- introduction of Genome Interaction
3D_genome_newgitbook
4DN_joint_analysis
about
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
BIOE183
gginteract
Interaction plot between two transcript based on ggplot2
MUSIC-docker
SigRec
Compressed sensing scheme for single cell expression profile recovery
SingleCellAnalysisFunc
include daily use function for single cell analysis and plots
Irenexzwen's Repositories
Irenexzwen/3D-genome-gitbook
An ebook- introduction of Genome Interaction
Irenexzwen/BIOE183
Irenexzwen/gginteract
Interaction plot between two transcript based on ggplot2
Irenexzwen/MUSIC-docker
Irenexzwen/176-Shortreads-aligner
CS176 finaly project, fast shortreads aligner using BWA
Irenexzwen/4DN_joint_analysis
Irenexzwen/about
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Irenexzwen/Applied-Genomic-Technologies
Irenexzwen/atom
:atom: The hackable text editor
Irenexzwen/awesome-rshiny
An awesome R-shiny list!
Irenexzwen/SingleCellAnalysisFunc
include daily use function for single cell analysis and plots
Irenexzwen/BENG183
Lecture materials
Irenexzwen/CHM13
Ultra-long reads for CHM13 genome assembly
Irenexzwen/csvtk
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
Irenexzwen/d2l-pytorch
This project reproduces the book Dive Into Deep Learning (www.d2l.ai), adapting the code from MXNet into PyTorch.
Irenexzwen/HiC_tools
A collection of tools for Hi-C data analysis
Irenexzwen/moRandi
Morandi color palette for R plot
Irenexzwen/MUSIC-Snakemake
Irenexzwen/MUSIC-tools
Irenexzwen/numpy-ml
Machine learning, in numpy
Irenexzwen/OnlinePCA.jl
Online Principal Component Analysis
Irenexzwen/RNA-seq-analysis
RNAseq analysis notes from Ming Tang
Irenexzwen/SARS-Human-DERank
Search of important human genes for viral infection
Irenexzwen/scRNA-seq-analysis
Irenexzwen/seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
Irenexzwen/Snakemake_ChIPseq_PE
Pipeline for the analysis of PE ChIP-seq data
Irenexzwen/styles
Official repository for Citation Style Language (CSL) citation styles.
Irenexzwen/test_wiki
Irenexzwen/TRAPeS
TCR Reconstruction Algorithm for Paired-End Single cell
Irenexzwen/universalmotif
Motif manipulation functions for R.