SRP

Structure.py outputs three files. The first containing all cells (outputsmtest.tsv), the second just foetal cells (fetest.tsv) and the third adult neuron cells (netest.tsv).

gene_count_merger.py just outputs the file containing all the cells

Old pipeline

THEfinalcode.R
normboxplot.R
topgenes.R

New pipeline analysis files: NP

index
alignment
mmquant
sc3
seurat