JMarzec
Development and application of pipelines for mining and analysing heterogenous sets of cancer data from microarray and next-generation sequencing platforms
Instituto de Medicina MolecularLisbon
Pinned Repositories
2017
Materials used during #NGSchool2017
ActiveDriverWGSR
ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data
BCN_Analytics
data_portal
Pipelines for Pancreatic Expression Database Analytics (http://www.analytics.pancreasexpression.org/pages)
data_retrieval
Scripts for automated data retrieval from ArrayExpress, GEO and SRA
github-games
A fun way to learn about Git and GitHub
Ominer
PIXdb
Analytics features developed for Prostate Integrative Expression Database (PIXdb) to conduct transcriptomic analyses using publicly available prostate cancer-related data.
TCGA-data-prep
Pipelines for downloading and analysing different types of TCGA data
transcriptomics_data_integration
Pipeline for integrative analysis of transcriptomics data
JMarzec's Repositories
JMarzec/data_retrieval
Scripts for automated data retrieval from ArrayExpress, GEO and SRA
JMarzec/Ominer
JMarzec/2017
Materials used during #NGSchool2017
JMarzec/ActiveDriverWGSR
ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data
JMarzec/BCN_Analytics
JMarzec/data_portal
Pipelines for Pancreatic Expression Database Analytics (http://www.analytics.pancreasexpression.org/pages)
JMarzec/github-games
A fun way to learn about Git and GitHub
JMarzec/PIXdb
Analytics features developed for Prostate Integrative Expression Database (PIXdb) to conduct transcriptomic analyses using publicly available prostate cancer-related data.
JMarzec/TCGA-data-prep
Pipelines for downloading and analysing different types of TCGA data
JMarzec/transcriptomics_data_integration
Pipeline for integrative analysis of transcriptomics data
JMarzec/live-demo
Trying workflowr
JMarzec/PED_Analytics