Pinned Repositories
beebar
Summarizes the results of Kaivan's MACS2 package (https://github.com/kxk302/MACS2) in a combination beeswarm/barplot graph. The geometric mean intersect ratio for each replicate is represented by a individual point ("bee") and the average intersect ratio for replicates is represented by a bar. Plots are faceted by windowsize.
Eco80_NNP
JFLabR
JPSiegMetaboMetaloRNA
Raw data and code for "The Metabolome Weakens RNA Helix Stability and Increases RNA Chemical Stability"
KertisThesis2021
All RNABOB descriptors, bash shell scripts, genomes, results, and data analysis code for Emma's thesis
learnbyexample.github.io
My super duper awesome programming blog
MACS2
Massage data so that peak detector can be used as valley detector
MeltR
Automated fitting of RNA/DNA absorbance melting curves and fluorescence binding isotherms in R
meltR.a.paper
R2easyR
Facilitates Mapping Experimental RNA Reactivity Data to Secondary Structures Drawn with R2R
JPSieg's Repositories
JPSieg/MeltR
Automated fitting of RNA/DNA absorbance melting curves and fluorescence binding isotherms in R
JPSieg/meltR.a.paper
JPSieg/R2easyR
Facilitates Mapping Experimental RNA Reactivity Data to Secondary Structures Drawn with R2R
JPSieg/JPSiegMetaboMetaloRNA
Raw data and code for "The Metabolome Weakens RNA Helix Stability and Increases RNA Chemical Stability"
JPSieg/beebar
Summarizes the results of Kaivan's MACS2 package (https://github.com/kxk302/MACS2) in a combination beeswarm/barplot graph. The geometric mean intersect ratio for each replicate is represented by a individual point ("bee") and the average intersect ratio for replicates is represented by a bar. Plots are faceted by windowsize.
JPSieg/Eco80_NNP
JPSieg/JFLabR
JPSieg/KertisThesis2021
All RNABOB descriptors, bash shell scripts, genomes, results, and data analysis code for Emma's thesis
JPSieg/learnbyexample.github.io
My super duper awesome programming blog
JPSieg/MACS2
Massage data so that peak detector can be used as valley detector
JPSieg/MetaboMgITC
Metabolite binding to divalent Mg cations at biologically relevant pH and monovalent salt concentrations
JPSieg/MMInter