/pyeed_dvc_demo

Demonstration of how to use DVC and ZnTrack to model EnzymeML

Primary LanguageJupyter Notebook

Data Version Control and ZnTrack for Parameter Studies

1st PyEED Workshop 16.5.2022, University of Stuttgart

ZnTrack DVC

The following notebook will demonstrate how to implement a parameter optimiztion using ZnTrack, PyEnzyme and DVC. These libraries/concepts faciliate a convenient way to set up workflows using Directed Acyclic Graphs that represent steps in the Machine Learning life cycle.

The following steps will be implemented using an OOP-based approach:

  • Model assignment
  • Parameter estimation
  • Fit statistics