JSHuisman

Pinned Repositories

covid19-additionalData
data repository for covid-19 additional data for shiny app
2 4 00
paper-code
Code for the manuscript "Estimation and worldwide monitoring of the effective reproductive number of SARS-CoV-2"
Language:R1 6 03
shiny-dailyRe
R app for daily Covid-19 Re estimates
Language:R19 7 232
conjugator
This package is designed to estimate plasmid conjugation rates for liquid mating cultures.
Language:R20
conjugator_paper
Language:R1 1 00
conjugator_shiny
Code powering https://ibz-shiny.ethz.ch/jhuisman/conjugator/
Language:R00
plasmid_phylo
Language:R10
Recorder
Language:R1 1 00
wastewaterRe
Language:R8 1 11
wastewater-influenza-dashboard
This repo is for estimating Re from influenza conentrations in wastewater and displaying estimates in a shiny app.
Language:R3 5 10

JSHuisman's Repositories

JSHuisman/wastewaterRe
Language:R8 1 11
JSHuisman/conjugator
This package is designed to estimate plasmid conjugation rates for liquid mating cultures.
Language:R20
JSHuisman/conjugator_paper
Language:R1 1 00
JSHuisman/plasmid_phylo
Language:R10
JSHuisman/Recorder
Language:R1 1 00
JSHuisman/conjugator_shiny
Code powering https://ibz-shiny.ethz.ch/jhuisman/conjugator/
Language:R00