JackieZhai
Ph.D. Student, University of Chinese Academy of Sciences. Research interests include Computer Vision and Connectomics.
Institute of Automation, Chinese Academy of SciencesBeijing, China
Pinned Repositories
AlphaZero_Gomoku
An implementation of the AlphaZero algorithm for Gomoku (also called Gobang or Five in a Row)
awesome-behavior-datasets
Open-source datasets for animal behavioral video analysis.
awesome-fm-datasets
Open source datasets for fluorescence microscopy (e.g., confocal, lightsheet, two/three-photon)
awesome-vem-datasets
Open source volume electron microscopy (vEM) datasets for connectomics.
CodeFocalPoint
The new/realistic version of repo TouchedFocalPoint.
JackieZhai.github.io
The source of "https://haozhai.site/".
SALEM2
SALEM^2: Segment Anything in Light and Electron Microscopy via Membrane Guidance
sam-hq
Segment Anything in High Quality (in 3D Volume?)
SiamBOMB
SiamBOMB: Siamese network using Background information for real-time Online Multi-species home-cage animal Behavioral analysis. (Updating)
JackieZhai's Repositories
JackieZhai/awesome-vem-datasets
Open source volume electron microscopy (vEM) datasets for connectomics.
JackieZhai/SALEM2
SALEM^2: Segment Anything in Light and Electron Microscopy via Membrane Guidance
JackieZhai/awesome-behavior-datasets
Open-source datasets for animal behavioral video analysis.
JackieZhai/CodeFocalPoint
The new/realistic version of repo TouchedFocalPoint.
JackieZhai/JackieZhai.github.io
The source of "https://haozhai.site/".
JackieZhai/sam-hq
Segment Anything in High Quality (in 3D Volume?)
JackieZhai/awesome-fm-datasets
Open source datasets for fluorescence microscopy (e.g., confocal, lightsheet, two/three-photon)
JackieZhai/Awesome-Neuron-Segmentation-in-EM-Images
A curated list of resources for 3D segmentation of neurites in EM images
JackieZhai/awesome-video-object-segmentation
:sunglasses: Awesome Video Object Segmentation
JackieZhai/cloud-files
Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.
JackieZhai/II-CATS
Intra- and Inter-Cellular Awareness for 3D Neuron Tracking and Segmentation in Large-Scale Connectomics
JackieZhai/ccf-deadlines
⏰ Collaboratively track deadlines of conferences recommended by CCF (Website, Python Cli, Wechat Applet) / If you find it useful, please star this project, thanks~
JackieZhai/cloud-volume
Read and write Neuroglancer datasets programmatically.
JackieZhai/CodeNeuroglancerTutorial
Codes for Neuroglancer 101
JackieZhai/CodeSparsePrecomputed
Convert sparsely stored 2D images to 3D precomputed fastly.
JackieZhai/corgie
Command line tool for registration of very large 3D volumes.
JackieZhai/fastmorph
Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing.
JackieZhai/flops-counter.pytorch
Flops counter for convolutional networks in pytorch framework
JackieZhai/Heavy_tailed_connectivity
Code and data used to perform the analyses in the paper "Heavy-tailed neuronal connectivity arises from Hebbian self-organization"
JackieZhai/igneous
Python cloud pipeline for Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Remapping, and more.
JackieZhai/JackieZhai
JackieZhai/JackieZhai.github.io-CDN
The cdn of "https://haozhai.site/".
JackieZhai/jekyll-theme-chirpy
A minimal, responsive, and powerful Jekyll theme for presenting professional writing.
JackieZhai/MobileSAM
This is the official code for MobileSAM project that makes SAM lightweight for mobile applications and beyond!
JackieZhai/mutex-watershed
The mutex watershed for image segmentation.
JackieZhai/neuroglancer
WebGL-based viewer for volumetric data
JackieZhai/neuVid
Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.
JackieZhai/pytracking
Visual tracking library based on PyTorch.
JackieZhai/segment-anything-2
The repository provides code for running inference with the Meta Segment Anything Model 2 (SAM 2), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
JackieZhai/SynapseCLR
A contrastive learning framework for 3D electron microscopy data