James-Kitson
Molecular ecologist studying ecological networks and molecular diagnostics Also member of @NewcastleUni-NetworkEcologyGroup @NCL-PPD @HullUni-bioinformatics
@NewcastleUni-NetworkEcologyGroup Newcastle upon Tyne, UK
Pinned Repositories
Kitson_et_al_NMB
Repository contains scripts and supplementary data for Kitson et al. - Nested metabarcoding manuscript
Aphid_parasitoid_phylogenetic_networks
Biogeography
This repo forms part of the Supplematary Material for Kitson, James J. N., Ben H. Warren, Christophe Thébaud, Dominique Strasberg, and Brent C. Emerson. 2018. “Community Assembly and Diversification in a Species-Rich Radiation of Island Weevils (Coleoptera: Cratopini).” Journal of Biogeography 45 (9): 2016–26.
co-occurrence
R scripts for performing co-occurrence analyses
Collection_stats
A set of scripts for analysing my collection data.
Cratopus_density
Dating_Crocs
A repo that contains all plotting and analysis scripts for plotting dated trees from MrBayes with nice names and scales etc.
James-Kitson.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Kitson_et_al_OPM2
This repository contains the analysis scripts for an in prep paper looking at parasitism across years in UK Oak Processionary Moth caterpillars
James-Kitson's Repositories
James-Kitson/Aphid_parasitoid_phylogenetic_networks
James-Kitson/Biogeography
This repo forms part of the Supplematary Material for Kitson, James J. N., Ben H. Warren, Christophe Thébaud, Dominique Strasberg, and Brent C. Emerson. 2018. “Community Assembly and Diversification in a Species-Rich Radiation of Island Weevils (Coleoptera: Cratopini).” Journal of Biogeography 45 (9): 2016–26.
James-Kitson/co-occurrence
R scripts for performing co-occurrence analyses
James-Kitson/Collection_stats
A set of scripts for analysing my collection data.
James-Kitson/Cratopus_density
James-Kitson/Dating_Crocs
A repo that contains all plotting and analysis scripts for plotting dated trees from MrBayes with nice names and scales etc.
James-Kitson/James-Kitson.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
James-Kitson/Kitson_et_al_OPM2
This repository contains the analysis scripts for an in prep paper looking at parasitism across years in UK Oak Processionary Moth caterpillars
James-Kitson/metabarcoding_clustering_analyses
A set of scripts for comparing metabarcoded samples compositions across sample type
James-Kitson/NMB_stats
A set of tools that I am working on for summarising output from metabarcoding studies
James-Kitson/OPM_nest_associates
James-Kitson/Phylo_clustering
James-Kitson/qcat
qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.
James-Kitson/Random_scripts