Pinned Repositories
2016_class_CMR
capture-mark-recapture class with Noble Hendrix and Billy Ernst in Chile 2016
2018_FSH556
Class materials for FSH556: Spatio-temporal models for ecologists in spring 2018 at UW
2024_FSH556
Materials for UW Class FSH 556 "Spatio-Temporal Models for Ecologists" in Spring 2024
Conway-Maxwell-Poisson
R package for calculating probability mass function or simulating draws from a Conway-Maxwell-Poisson distributimon
FishData
Compile and harmonize catch rates from fishery-independent surveys of fish populations
mixed-effects
Example code for mixed-effects modelling paper
spatial_delay-difference
Spatial delay-difference model
spatial_DFA
Spatial dynamic factor analysis, for estimating spatiotemporal density dependence in community dynamics
spatial_factor_analysis
Spatial factor analysis: a tool for decomposing species density into a small number of latent maps
Spatio-temporal-models-for-ecologists
Code associated with textbook "Spatio-Temporal Models for Ecologists"
James-Thorson's Repositories
James-Thorson/spatial_condition_factor
Spatial analysis tools for estimating spatial and spatiotemporal variation in individual condition