Pinned Repositories
100-examples-of-Python
Some examples of Python on basic applications
5years
Amplicon
High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis
amplicon-1
Statistics and visualization for amplicon data
Biopython-cn
Biopython Tutorial Chinese Translation
EasyMetagenome
Easy Metagenome Pipeline 2019 (1.0)
GEO
libpku
北京大学课程资料整理
SCycDB
shared_scripts
shared scripts in Lu Lab
JameyZhu's Repositories
JameyZhu/EasyMetagenome
Easy Metagenome Pipeline 2019 (1.0)
JameyZhu/SCycDB
JameyZhu/Amplicon
High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis
JameyZhu/amplicon-1
Statistics and visualization for amplicon data
JameyZhu/biobakery
bioBakery tools for meta'omic profiling
JameyZhu/db
Scripts and databases for amplicon and metagenome
JameyZhu/dev-sidecar
开发者边车，github打不开，github加速，git clone加速，git release下载加速，stackoverflow加速
JameyZhu/DiTing
DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data
JameyZhu/EasyAmplicon
Easy Amplicon data analysis pipeline
JameyZhu/enrichM
Toolbox for comparative genomics of MAGs
JameyZhu/FeGenie
HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes
JameyZhu/ggcor-1
ggcor备用源，版权归houyunhuang所有，本源仅供应急使用
JameyZhu/google-access-helper
谷歌访问助手破解版、谷歌翻墙、谷歌梯子、谷歌梯子扩展工具、谷歌商店访问、Chrome翻墙
JameyZhu/GTDBTk
GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
JameyZhu/iCAMP1
Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)
JameyZhu/MAG_Snakemake_wf
Recovery of prokaryotic genomes from shotgun metagenomic sequencing data
JameyZhu/Megagenome_learing
metagenome microbiome soil env.
JameyZhu/metaGEM
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
JameyZhu/metaWRAP
MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
JameyZhu/Microbiome
Microbiome codes and Peplines
JameyZhu/NCyc
JameyZhu/Note
JameyZhu/NST
Normalized Stochasticity Ratio in community assembly
JameyZhu/Phosphorus-cycling-database
This is a comprehensive database for fast and accurately analyzing the phosphorus cycling database.
JameyZhu/sheng-xin-xiao-bai-yu
历史文档备份
JameyZhu/sheng-xin-xiao-bai-yu-2021
历史文档备份（2021年）
JameyZhu/TBtools
GUI/CommandLine Tool Box for biologistists to utilize NGS data.
JameyZhu/warming-network-complexity-stability
Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"
JameyZhu/WGCNA
JameyZhu/Workshop
Workshop weekly at Liu Lab