NeuronBridge is a web-based service for neuron matching and searching in Drosophila melanogaster. It indexes large data sets of LM and EM imagery to enable finding similar neurons across modalities and data sets. A preprint descibing the service is available on bioRxiv.
Visit the service here:
Note
The pre-release site is only accessible on Janelia's internal network
This repository contains the web client. Other related repositories:
- neuronbridge-services - Backend implementation
- neuronbridge-aligners - Aligner implementation
- neuronbridge-precompute - Precompute scripts
- neuronbridge-python - Python API
- neuronbridge-vol-viewer - Web-based 3D Volume Viewer
- colormipsearch - Color Depth MIP Search Algorithms
The imagery and metadata are stored on AWS S3, and are available for browsing and reuse, subject to the license agreement:
View the Release Notes for a history of changes to the web client.
Read the Developer's Guide for more information about developing and deploying this service.
All code related to NeuronBridge is made available under the 3-Clause BSD License.
All data served by the application is made available under the Creative Commons Attribution 4.0 International License.
Studies and publications that use this software should cite doi:10.1101/2022.07.20.500311.