/HistopathologyAugmentationResearch

Repository containing code, model weights, and manual data annotation for a research project "Improving Quality Control of Whole Slide Images by Explicit Artifact Augmentation"

Primary LanguagePythonApache License 2.0Apache-2.0

Contained is the base library for augmentation as of publication.

Additionally code for the classification module and segmentation is included.

For easy installation and reproduction of results, libhaa library is installable by running

pip install -e .

For segmentation inference we provide the weights in the Releases github panel. Classification weights will be made available soon.