regLM is a toolkit for training hyenaDNA-based autoregressive language models on DNA sequences and generating novel regulatory elements.
To use regLM, first install HyenaDNA from GitHub following the instructions: https://github.com/HazyResearch/hyena-dna
git clone https://github.com/Genentech/regLM.git
cd regLM
pip install .
https://genome.cshlp.org/content/early/2024/09/24/gr.279142.124.abstract
Lal, A., Garfield, D., Biancalani, T., & Eraslan, G. (2024). Designing realistic regulatory DNA with autoregressive language models. Genome Research.