Pinned Repositories
AD_finemap
Code supporting analyses in paper on fine-mapping AD loci
CapNetProtStruct
Capsule Networks for improving protein secondary structure prediction accuracy
ColonStudy
colon study of stage 2 and stage 3
cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
ensembleCNV
Epistasis
R code: Use EBEN package in R to analyze the main and epistasis of miRNAs.
GS
This includes the genome selection scripts for four models, rrBLUP, Bayesian Lasso, random forest and BSLMM models.
jmtools
This is a sandbox of scripts that I have created (~98%) or gathered from others since 2007. It is only stored here for utility and posterity. They are all constantly being updated, thus they should be treated as work-in-progress - raw and unpolished. Please ask for permission before publishing.
ldsc
LD Score Regression (LDSC)
SIP
Super Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types
Jia21's Repositories
Jia21/Epistasis
R code: Use EBEN package in R to analyze the main and epistasis of miRNAs.
Jia21/AD_finemap
Code supporting analyses in paper on fine-mapping AD loci
Jia21/CapNetProtStruct
Capsule Networks for improving protein secondary structure prediction accuracy
Jia21/ColonStudy
colon study of stage 2 and stage 3
Jia21/cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Jia21/ensembleCNV
Jia21/GS
This includes the genome selection scripts for four models, rrBLUP, Bayesian Lasso, random forest and BSLMM models.
Jia21/jmtools
This is a sandbox of scripts that I have created (~98%) or gathered from others since 2007. It is only stored here for utility and posterity. They are all constantly being updated, thus they should be treated as work-in-progress - raw and unpolished. Please ask for permission before publishing.
Jia21/ldsc
LD Score Regression (LDSC)
Jia21/SIP
Super Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types
Jia21/TCA