JohnStout
My scientific interests are focused on understanding how the brain learns and uses information to guide choices. I also love developing tools :)
University of ConnecticutFarmington, CT
Pinned Repositories
GriffinCode
caiman_fastplotlib_notebooks
Jupyter-lab toolbox to aid in calcium_imaging analysis/visualization using CaImAn and fastplotlib
CodingClub
decode_lab_code
A python toolbox to support analyses performed in the DECODE lab at Nemours Childrens Hospital in Wilmington DE, led by A.Hernan and R.Scott
GriffinLabCode
Code used for processing and analyzing data from Amy Griffins laboratory at the University of Delaware
hernan-lab-to-nwb
Lab code that supports conversion of various kinds of data to NWB. Currently under development
Maze-Automation
Code in this folder is for working with an automated maze
MazeEngineersCode
This code was written to interface with the maze engineers hardware and control an automated T-maze
neuralynx_rereference
Basic MATLAB code to perform rereferencing
RawFileConverter
Code to convert .raw files using memory efficient techniques
JohnStout's Repositories
JohnStout/caiman_fastplotlib_notebooks
Jupyter-lab toolbox to aid in calcium_imaging analysis/visualization using CaImAn and fastplotlib
JohnStout/GriffinLabCode
Code used for processing and analyzing data from Amy Griffins laboratory at the University of Delaware
JohnStout/CodingClub
JohnStout/decode_lab_code
A python toolbox to support analyses performed in the DECODE lab at Nemours Childrens Hospital in Wilmington DE, led by A.Hernan and R.Scott
JohnStout/hernan-lab-to-nwb
Lab code that supports conversion of various kinds of data to NWB. Currently under development
JohnStout/Maze-Automation
Code in this folder is for working with an automated maze
JohnStout/MazeEngineersCode
This code was written to interface with the maze engineers hardware and control an automated T-maze
JohnStout/neuralynx_rereference
Basic MATLAB code to perform rereferencing
JohnStout/RawFileConverter
Code to convert .raw files using memory efficient techniques
JohnStout/nwb_tutorial
Tutorials for learning NWB
JohnStout/Portfolio
A collection of code organized by projects
JohnStout/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
JohnStout/suite2p_fastplotlib_notebooks
suite2p with fastplotlib visualizations
JohnStout/Talks-and-Trainings
A collection of code for the purposes of delivering talks and trainings
JohnStout/ThinkBayes
Code repository for Think Bayes.
JohnStout/Webpage--
HTML code from Jon Barron