Pinned Repositories
MATLAB_DPAD
The original matlab implementation of the DPAD software (originally called CSynBI_LPAD)
MATLAB_DPAD_OLD
aiotbotania
This mod adds AIOTs for Botania tools. Because an AIOT is so much better than just a tool.
ALYtools
Bioimaging analysis application
AnaMorf
FIJI Plugin for automated analysis of filamentous structures
ape
Application Platform and Engine - Generic Platform & Engine for deploying Applications using c++.
AutonoMouseControl
biocompute-dm
An overarching platform for bioinformatics pipeline management and execution on mixed architecture infrastructures
cbioportal
cBioPortal for Cancer Genomics
CORPGE
JonathanCSmith's Repositories
JonathanCSmith/LitRPGTools
Tool set for creating LitRPG novels. Uses Google Sheets integration for outputting values (which can then be dynamically imported into Google Docs) allowing for fully dynamic data integration into your stories.
JonathanCSmith/AnaMorf
FIJI Plugin for automated analysis of filamentous structures
JonathanCSmith/napari-clemreg
An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
JonathanCSmith/CORPGE
JonathanCSmith/JonathanCSmith
Config files for my GitHub profile.
JonathanCSmith/pyclesperanto_prototype
http://clesperanto.net
JonathanCSmith/ALYtools
Bioimaging analysis application
JonathanCSmith/aiotbotania
This mod adds AIOTs for Botania tools. Because an AIOT is so much better than just a tool.
JonathanCSmith/dndiscord
A discord bot facillitating DnD
JonathanCSmith/UndergroundBiomesConstructs
Underground Biomes Constructs for Minecraft 1.12.2 / 1.13.2
JonathanCSmith/StellarisModSmoosher
This program attempts to discover all of your mods, 'smoosh' them into a single mod and allow easy conflict resolving.
JonathanCSmith/ape
Application Platform and Engine - Generic Platform & Engine for deploying Applications using c++.
JonathanCSmith/Progress
JonathanCSmith/Progression
JonathanCSmith/daqface
Interface with the DAQ using PyDAQmx
JonathanCSmith/AutonoMouseControl
JonathanCSmith/MultiArchitectureExecutor
JonathanCSmith/react-d3-tree
:deciduous_tree: React component to create interactive D3 tree graphs
JonathanCSmith/cbioportal
cBioPortal for Cancer Genomics
JonathanCSmith/webknossos-cuber
Cubing tool for webKnossos
JonathanCSmith/mpicbg
Fiji module for image transformation and related algorithms
JonathanCSmith/game-of-life-java
Conway's Game of Life
JonathanCSmith/flask-mongoengine
MongoEngine flask extension with WTF model forms support
JonathanCSmith/dnd_suite
JonathanCSmith/register_virtual_stack_slices
Fiji package for registering and transforming arbitrarily large sequences of images
JonathanCSmith/biocompute-dm
An overarching platform for bioinformatics pipeline management and execution on mixed architecture infrastructures
JonathanCSmith/dpad
Data Processing, Analysis and Display - A program to manage synthetic biological data and provide a plugin infrastructure for data analysis
JonathanCSmith/MATLAB_DPAD_OLD
JonathanCSmith/MATLAB_DPAD
The original matlab implementation of the DPAD software (originally called CSynBI_LPAD)
JonathanCSmith/robotController