Pinned Repositories
Jondeen's Repositories
Jondeen/VipsML
Vips frameworks for Machine Learning
Jondeen/alphafold
Open source code for AlphaFold.
Jondeen/Bika-LIMS
Web-based Laboratory Information Management System
Jondeen/celltypist
A tool for semi-automatic cell type annotation
Jondeen/fiji
Fiji Is Just ImageJ
Jondeen/image-tiff
TIFF decoding and encoding library in pure Rust
Jondeen/imagej
ImageJ2: the next-generation version of ImageJ
Jondeen/imagej-updater
The automatic updater for ImageJ
Jondeen/imagej1
A mirror of Wayne Rasband's imagej.git repository on fiji.sc, updated once a night
Jondeen/jpegxr
Rust wrapper for Microsoft's C JPEG XR codec library
Jondeen/kubed
Kubernetes with Dataporten Support tools e.g. kubectl config
Jondeen/libCZI
Open Source Cross-Platform C++ library to read CZI image files
Jondeen/libvips
A fast image processing library with low memory needs.
Jondeen/lucky-commit
Customize your git commit hashes!
Jondeen/methylKit
R package for DNA methylation analysis
Jondeen/nip2
A spreadsheet-like GUI for libvips.
Jondeen/openseadragon
An open-source, web-based viewer for zoomable images, implemented in pure JavaScript.
Jondeen/OpenSeadragonImagingHelper
Jondeen/openslide-python
Thresholding and navigational function implementation on top of Openslide Deepzoom example
Jondeen/Pydev
Python IDE for Eclipse
Jondeen/scijava-common
Configuration files and scripts common to the SciJava software stack.
Jondeen/shatrip
Sha256 incremental hasher/verifier
Jondeen/SpaTalk
Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data
Jondeen/svg-overlay
An OpenSeadragon plugin that adds SVG overlay capability.