Joon-20

Joon-20's Stars

• rrwick/Porechop

  adapter trimmer for Oxford Nanopore reads

  Language:C++340128

• josiegleeson/direct-rna-5Y-study-2022

  This repository contains scripts used in the dRNA sequencing with Nanopore thesis.

  Language:Shell74

• botaoliuphd/rnase_manuscript

  Analysis scripts and data files used for the RNase titration manuscript.

  Language:R1

• linsalrob/SRA_Metadata

  Get, parse, and extract information from the SRA metadata files

  Language:Python365

• Magdoll/cDNA_Cupcake

  Miscellaneous collection of Python and R scripts for processing Iso-Seq data

  Language:Python257104

• IDEELResearch/nanopore-pipelines

  Scripts and pipelines for analyzing Oxford Nanopore long-read data

  Language:Shell33

• nanopore-wgs-consortium/NA12878

  Data and analysis for NA12878 genome on nanopore

  Language:Python37592

• nellore/intropolis

  Exon-exon splice junctions across SRA

  399

• Xinglab/PEGASAS

  Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)

  Language:Python1811

• Xinglab/Myc-regulated_AS_PrCa_paper

  Scripts for plotting figures and running analysis throughout the manuscript

  Language:R114

• saketkc/gencode_regions

  Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files

  Language:Jupyter Notebook10253

• stephenfloor/extract-transcript-regions

  For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and CDS).

  Language:Python3314

• jackhump/FUS_intron_retention

  Scripts written for the FUS NLS mutation comparison with FUS KO project

  Language:R1

• LabTranslationalArchitectomics/riboWaltz

  optimization of ribosome P-site positioning in ribosome profiling data

  Language:HTML4512

• christopher-vollmers/Mandalorion-Episode-II

  Version II of Mandalorion

  Language:Python61

• rvolden/Mandalorion-Episode-II

  Version II of Mandalorion

  Language:Python322