Jorsorokin
Computational and systems neuroscientist. Interested in the intersection of cs, statistics, and biology.
@recursionpharma
Pinned Repositories
ChaosAnalysis
A matlab package for analyzing chaotic properties of time series data
Data_visualization
various functions for data visulization (mostly centered around neuroscience)
extracellular_spiking_simulation
MATLAB code for simulating extracellular multi-electrode recordings of neural action potentials and local field potential
HDBSCAN
Hierarchical density based clustering for applications with noise
hlab-analysis-methods
Code, slides, and figs on various analysis techniques
JStorch
repository for abstracting details away from pytorch API for a simpler interface to set up NNs
ModelNeuro
Simulation of HH-type neurons
neo-matlab
A MATLAB-version of NEO - a python package for organizing large datasets of multi-channel extracellular recordings.
neurite_analysis
MATLAB code for the filtering, detection, and feature extraction of neurites in 2D images
SingularSpectrum
A MATLAB class for performing and visualizing singular-spectrum analysis (SSA), a non-parametric spectral decomposition technique for time series
Jorsorokin's Repositories
Jorsorokin/HDBSCAN
Hierarchical density based clustering for applications with noise
Jorsorokin/ChaosAnalysis
A matlab package for analyzing chaotic properties of time series data
Jorsorokin/SingularSpectrum
A MATLAB class for performing and visualizing singular-spectrum analysis (SSA), a non-parametric spectral decomposition technique for time series
Jorsorokin/Data_visualization
various functions for data visulization (mostly centered around neuroscience)
Jorsorokin/extracellular_spiking_simulation
MATLAB code for simulating extracellular multi-electrode recordings of neural action potentials and local field potential
Jorsorokin/hlab-analysis-methods
Code, slides, and figs on various analysis techniques
Jorsorokin/JStorch
repository for abstracting details away from pytorch API for a simpler interface to set up NNs
Jorsorokin/ModelNeuro
Simulation of HH-type neurons
Jorsorokin/neo-matlab
A MATLAB-version of NEO - a python package for organizing large datasets of multi-channel extracellular recordings.
Jorsorokin/neurite_analysis
MATLAB code for the filtering, detection, and feature extraction of neurites in 2D images
Jorsorokin/PulsePal
Open source pulse train generator
Jorsorokin/baselines
OpenAI Baselines: high-quality implementations of reinforcement learning algorithms
Jorsorokin/bibliography
bibtex files
Jorsorokin/BioQC
Detect tissue heterogeneity in gene expression data with BioQC
Jorsorokin/dit
Python package for information theory.
Jorsorokin/garage
A toolkit for reproducible reinforcement learning research
Jorsorokin/GSEApy
Gene Set Enrichment Analysis in Python
Jorsorokin/JAGA_software
code for capturing and displaying JAGA wireless neural recordings. The code here is based on open-source software courteously provided by the engineers at JAGA Inc. (https://www.jinga-hi.com)
Jorsorokin/powerlevel10k
A Zsh theme
Jorsorokin/pyarchical
hierarchical regression models in python
Jorsorokin/pyshuffle
A series of modules for shuffling procedures and statistical tests
Jorsorokin/pytorch-esn
An Echo State Network module for PyTorch.
Jorsorokin/quick-portfolio
Use this template if you need a quick developer / data science portfolio! Based on a Minimal Jekyll theme for GitHub Pages.
Jorsorokin/reinforcement-learning
Implementation of Reinforcement Learning Algorithms. Python, OpenAI Gym, Tensorflow. Exercises and Solutions to accompany Sutton's Book and David Silver's course.
Jorsorokin/SWDetector
MATLAB code for SWD classification (absence seizures) in EEG; comes with both general purpose code for building a logistic-regression classifier using wavelet-derived features, and a pre-built model for detecting SWDs in EEG data
Jorsorokin/Time-series-classification-and-clustering-with-Reservoir-Computing
Library for implementing reservoir computing models (echo state networks) for multivariate time series classification and clustering.
Jorsorokin/ZIFA
Zero-inflated dimensionality reduction algorithm for single-cell data