Pinned Repositories
PLM-ARG
Homology Independent Antibiotic Resistance Gene Identification based on a Protein Language Model
HiFun
Homology Independent Protein Function prediction on Protein-Language Self-Attention Model
Urban-MAGs
Urban_ARGs
abricate
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
alphafold2
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
ARG-global
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk of ARGs from multiple perspectives by using these code.
args_oap
ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database
atlas
ATLAS - Three commands to start analysing your metagenome data
Bioinfo_course_python
Junwu302's Repositories
Junwu302/Urban_RNA_Virome
Junwu302/Workshop
课题组每周研讨会
Junwu302/args_oap
ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database
Junwu302/PLM-ARG
Homology Independent Antibiotic Resistance Gene Identification based on a Protein Language Model
Junwu302/Deep-Reinforcement-Learning-Algorithms-with-PyTorch
PyTorch implementations of deep reinforcement learning algorithms and environments
Junwu302/DNA-Diffusion
🧬 Understanding the code of life: Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨
Junwu302/PyTorch_Tutorial
《Pytorch模型训练实用教程》中配套代码
Junwu302/Mouse_Immunity
Junwu302/protein-sequence-models
Junwu302/RVMT
Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.
Junwu302/HiFun
Homology Independent Protein Function prediction on Protein-Language Self-Attention Model
Junwu302/External-Attention-pytorch
🍀 Pytorch implementation of various Attention Mechanisms, MLP, Re-parameter, Convolution, which is helpful to further understand papers.⭐⭐⭐
Junwu302/MGV
Supporting code for uncultivated gut virus manuscript
Junwu302/papers_for_protein_design_using_DL
List of papers about Proteins Design using Deep Learning
Junwu302/Urban_ARGs
Junwu302/math_seq2tree
Seq2Tree model for Solving Math Word Problems
Junwu302/ARG-global
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk of ARGs from multiple perspectives by using these code.
Junwu302/Urban-MAGs
Junwu302/nlp-tutorial
Natural Language Processing Tutorial for Deep Learning Researchers
Junwu302/protein-classification
Deep sequence models for protein classification
Junwu302/DataAnalysisFor2cChIP
Junwu302/alphafold2
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
Junwu302/Cas13
Junwu302/CAP2
Junwu302/GTDBTk
GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
Junwu302/NSCLC_TMI
Junwu302/distribution-is-all-you-need
The basic distribution probability Tutorial for Deep Learning Researchers
Junwu302/ocean_resistome
resistome on TARA ocean samples
Junwu302/Bioinfo_course_python
Junwu302/ChIP-seq-analysis
ChIP-seq analysis notes from Ming Tang