Files in chromosome directory
shig913 opened this issue · 1 comments
shig913 commented
Thank you for this great tool!
I want to know files in the directory, autohic_results/chromosome.
What do the files xxx_final.fasta and xxx_FINAL.fasta mean?
Jwindler commented
You can compare their sequence lengths and names to see the difference. Generally speaking, xxx_FINAL.fasta
differentiates scaffolds, merges contigs, and changes sequence names.