Pinned Repositories
hyb2
A program for analyzing proximity ligation experiments from mapped files in the Fastq or SAM format to 1) generate a list of chimeric interactions with their coordinates, sequence, and folding energy, 2) plot contact density map of selected genes, 3) generate intra-/intermolecular RNA structure of any selected regions
VARNA
Visualization Application for RNA
Jylau14's Repositories
Jylau14/hyb2
A program for analyzing proximity ligation experiments from mapped files in the Fastq or SAM format to 1) generate a list of chimeric interactions with their coordinates, sequence, and folding energy, 2) plot contact density map of selected genes, 3) generate intra-/intermolecular RNA structure of any selected regions