Jyyin333

Jyyin333's Stars

• Nanostring-Biostats/CosMx-Analysis-Scratch-Space

  This repository is an exploratory resource to accelerate opensource analysis of CosMx® Spatial Molecular Imager (SMI) data. Contained here are and writeups and vignettes addressing a variety of topics discussed when analyzing single-cell spatial data.

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• TrinityCTAT/Trinity_CTAT

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• crazyhottommy/ChIP-seq-analysis

  ChIP-seq analysis notes from Ming Tang

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• Boyle-Lab/Blacklist

  Application for making ENCODE Blacklists

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• csf-ngs/fastqc

  csf fork of fastqc for usage on selected reads of unaligned bam file

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• staciawyman/blender

  This BLENDER has been sunsetted

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• zeitlingerlab/Shao_NG_2017

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• macs3-project/MACS

  MACS -- Model-based Analysis of ChIP-Seq

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• jmzeng1314/GEO

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• zeitlingerlab/he_johnston_nbt_2014

  Analysis code for our ChIP-nexus Nature Biotechnology manuscript

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• jmzeng1314/NGS-pipeline

  By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

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• hms-dbmi/spp

  SPP - R package for analysis of ChIP-seq and other functional sequencing data

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• rajanil/msCentipede

  A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.

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• xie186/Python-100-Days-EN

  Python - 100 Days: Novice to Master

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• hbctraining/In-depth-NGS-Data-Analysis-Course

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