Pinned Repositories
bpipe
Bpipe - a tool for running and managing bioinformatics pipelines
CHSLABmiRNApipeline
Teach using, miRNA-seq analysis pipeline
clusterProfiler
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
espresso
eSPRESSO
KC-Lan
kc-lan.github.io
NCTU_Formosa
it is a software code about NCTU_Formosa
spresso
SPRESSO (Spatial Reconstruction by Stochastic Self-Organizing map)
Volcanoplot.R
KC-Lan's Repositories
KC-Lan/kc-lan.github.io
KC-Lan/espresso
eSPRESSO
KC-Lan/KC-Lan
KC-Lan/spresso
SPRESSO (Spatial Reconstruction by Stochastic Self-Organizing map)
KC-Lan/bpipe
Bpipe - a tool for running and managing bioinformatics pipelines
KC-Lan/clusterProfiler
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
KC-Lan/cmapR
R
KC-Lan/ComplexHeatmap
Make Complex Heatmaps
KC-Lan/DataAnalyticsWithRBook
介紹如何使用R完成資料讀取、處理、分析與呈現，以及大數據技術與R的整合
KC-Lan/DGE_workshop
KC-Lan/fgsea
Fast Gene Set Enrichment Analysis
KC-Lan/gatk
Official code repository for GATK versions 4 and up
KC-Lan/gdrive
Google Drive CLI Client
KC-Lan/htseq
HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
KC-Lan/Interactive-3D-Plotting-in-Seurat-3.0.0
This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
KC-Lan/loomR
An R-based interface for loom files
KC-Lan/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
KC-Lan/Python-100-Days
Python - 100天从新手到大师
KC-Lan/RSEM
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
KC-Lan/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
KC-Lan/scRNA.seq.course
Analysis of single cell RNA-seq data course
KC-Lan/scvelo
RNA Velocity generalized through dynamical modeling
KC-Lan/SecondRound
初學者寫給初學者的演算法教學
KC-Lan/seurat
R toolkit for single cell genomics
KC-Lan/seurat-wrappers
Community-provided extensions to Seurat
KC-Lan/Slideseq
KC-Lan/sports1.0
Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
KC-Lan/STAR
RNA-seq aligner
KC-Lan/STEM_DREM
Short Time-series Expression Miner (STEM) and Dynamic Regulatory Events Miner (DREM)
KC-Lan/velocyto.R
RNA velocity estimation in R