/admix4pop

Admixture estimation for population. Used for gene ancestral analysis.

Primary LanguagePython

Admix4Pop

Admixture estimation for population.

Data

  • populations.txt: allele frequencies for each reference population
  • mixture.txt: allele frequncies for mixture population (to be analyzed)

Result

The program will calculate fraction of each reference population for the mixture population.

Run

python3 admix.py --tolerance=1e-3 --population=population.txt --mixture=mixture.txt