KanduriC
PostDoctoral Research Fellow at the University of Oslo | Rstats | Data Science
University of OsloOslo
Pinned Repositories
bionumpy
Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
2016-07-01-exampleSiteSCW
AirPollutionMonitoring
R functions to interact with the air pollution monitoring data
datasciencecoursera
Created as part of a course work (Data Scientist's toolbox; Coursera)
datasharing
The Leek group guide to data sharing
demo_reproducibility_kanduricetal2021
Demonstration of reproducibility and deployability of the computational workflow of the article "Profiling the baseline performance and limits of machine learning models for adaptive immune receptor repertoire classification" (https://doi.org/10.1101/2021.05.23.445346)
simAIRR
A tool for simulation of antigen-experienced adaptive immune receptor repertoire (AIRR) datasets for benchmarking of machine learning (ML) methods.
transcriptomicsBatchEffectSim
scripts to simulate batch and biological effects in transcriptomics data to explore the problem terrain of handling batch effects
usecases_simairr
immuneML
immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.
KanduriC's Repositories
KanduriC/2016-07-01-exampleSiteSCW
KanduriC/AirPollutionMonitoring
R functions to interact with the air pollution monitoring data
KanduriC/datasciencecoursera
Created as part of a course work (Data Scientist's toolbox; Coursera)
KanduriC/datasharing
The Leek group guide to data sharing
KanduriC/demo_reproducibility_kanduricetal2021
Demonstration of reproducibility and deployability of the computational workflow of the article "Profiling the baseline performance and limits of machine learning models for adaptive immune receptor repertoire classification" (https://doi.org/10.1101/2021.05.23.445346)
KanduriC/ExData_Plotting1
Plotting Assignment 1 for Exploratory Data Analysis
KanduriC/GenomeBuildPredictor
Predicts the genome build version of genomic track files, if any of the sequence coordinates in the input track file are unique to a genome build version
KanduriC/GenomicOverlap
To compute the cumulative overlap of the regions between two files containing genomic intervals
KanduriC/GenRank
Candidate gene prioritization based on convergent evidence
KanduriC/GenRank_updated
updated GenRank just for build checking
KanduriC/simAIRR
A tool for simulation of antigen-experienced adaptive immune receptor repertoire (AIRR) datasets for benchmarking of machine learning (ML) methods.
KanduriC/transcriptomicsBatchEffectSim
scripts to simulate batch and biological effects in transcriptomics data to explore the problem terrain of handling batch effects
KanduriC/usecases_simairr
KanduriC/github_actions_tutorial
KanduriC/KanduriC.github.io
Personal Homepage
KanduriC/KanduriC_examplecode
KanduriC/ligo_usecase_3
KanduriC/PML_Aug_2015
Repository for Practical Machine Learning course on Coursera
KanduriC/ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera
KanduriC/r-novice-gapminder
Introduction to R for non-programmers using gapminder data.