KoslickiLab/L2-UniFrac
Expansion upon Median Unifrac to compute average phylogenetic distances between samples according to their UniFrac distance without producing negative abundance vectors.
Python
Issues
- 0
merge profile function
#29 opened by raquellewei - 0
WGS related functions
#28 opened by raquellewei - 0
Remove L1UniFrac.py
#26 opened by raquellewei - 0
create parseData.py
#25 opened by raquellewei - 0
Split main.py into individual scripts performing one function each and include documentations
#27 opened by raquellewei - 2
- 1
This is a todo
#24 opened by dkoslicki - 0
Conclusion/Discussion
#22 opened by dkoslicki - 0
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- 0
Experiments
#20 opened by dkoslicki - 0
- 0
Methods section
#19 opened by dkoslicki - 0
Write introduction
#17 opened by dkoslicki - 0
PCoA on means
#11 opened by dkoslicki - 0
Medians/Means
#9 opened by dkoslicki - 0
Pre-process all the samples
#8 opened by dkoslicki - 0
Investigate more efficient SVD algorithms
#18 opened by dkoslicki - 0
- 0
Implement DPCoA
#12 opened by dkoslicki - 0
- 0
Publish to Bioconda and PyPi
#15 opened by dkoslicki - 0
Assess clustering
#7 opened by dkoslicki - 0
Clustering
#6 opened by dkoslicki - 0
- 5
- 1
Missing taxonomic data in GreenGenes February 4, 2011 (referenced in supplementary information as source)
#3 opened by andrew-j-millward - 1
Assertion error here.
#1 opened by andrew-j-millward